If more than 50 genes/sequences are provided as input, then the associated running time can take some time. Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes. After processing you will be send an email with a link to the created phylogenetic tree.
The selection modi are exclusive: please choose either Gene selection or Species selection.
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";
$selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";
$num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 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'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 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'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 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'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 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'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 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'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 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'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 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=> 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 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'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 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'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 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'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 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'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 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'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 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'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 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=> 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 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'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 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'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 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'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 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'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 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'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 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'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 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=> 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 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'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 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'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 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'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 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'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 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'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 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'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 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=> 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ) $local_species = 'cbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 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'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 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'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 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'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ) $local_species = 'cbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ) $local_species = 'cre' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ) $local_species = 'cre' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 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'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 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'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 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'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 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=> 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 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'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 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'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 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'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 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'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 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'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 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'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 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=> 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 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'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 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'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 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'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 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'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 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'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 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'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 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=> 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 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'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 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'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 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'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 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'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 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'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 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'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 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=> 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 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'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 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'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 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'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 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'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 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'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 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'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 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=> 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 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'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 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'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 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'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 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'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 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'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ) $local_species = 'mco' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ) $local_species = 'mco' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 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'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 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=> 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 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'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 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'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 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'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 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'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 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'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 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'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 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=> 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 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'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 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'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 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'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 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'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 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'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ) $local_species = 'pco' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ) $local_species = 'pco' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 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'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 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=> 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 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'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 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'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 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'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 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'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 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'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ) $local_species = 'shi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 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'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 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=> 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ) $local_species = 'shi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 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'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 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'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 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'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 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'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 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'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 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'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 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=> 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 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'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 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'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 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'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 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'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 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'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 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'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 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=> 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 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'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 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'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 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'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 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'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 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'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 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'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 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=> 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 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'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 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'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 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'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ), 'gf_id' => 'HOM05D000527', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000527' ), 'data_identifier' => 'HOM05D000527', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000527', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1034', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p06130' => 'bna', 'A04p13430' => 'bna', 'A08p00350' => 'bna', 'A09p01450' => 'bna', 'A09p50380' => 'bna', 'A10p19690' => 'bna', 'Aa31LG10G12350' => 'aar', 'Aa31LG10G510' => 'aar', 'Aa31LG1G14360' => 'aar', 'Aa31LG9G1220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2812' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.4350' => 'aag', 'Actinidia06005' => 'ach', 'Actinidia08836' => 'ach', 'Actinidia10585' => 'ach', 'Actinidia17241' => 'ach', 'Actinidia17242' => 'ach', 'Actinidia19120' => 'ach', 'Actinidia21389' => 'ach', 'Actinidia21953' => 'ach', 'Actinidia25102' => 'ach', 'Actinidia26621' => 'ach', 'Actinidia30736' => 'ach', 'Actinidia36103' => 'ach', 'Actinidia38554' => 'ach', 'Actinidia40499' => 'ach', 'Ah.02g110790' => 'amhyb', 'Ah.02g112440' => 'amhyb', 'Ah.04g151640' => 'amhyb', 'Ah.05g167790' => 'amhyb', 'Ah.15g095530' => 'amhyb', 'AL1G63800' => 'aly', 'AL5G39100' => 'aly', 'AL6G31800' => 'aly', 'AL6G51320' => 'aly', 'AL7G49480' => 'aly', 'Aqoxy108s001' => 'aox', 'Aqoxy108s002' => 'aox', 'Aqoxy2G00191' => 'aox', 'Aqoxy3G01065' => 'aox', 'Aqoxy3G01672' => 'aox', 'Aqoxy4G02316' => 'aox', 'Aqoxy5G02693' => 'aox', 'Aqoxy5G03670' => 'aox', 'Aqoxy6G01015' => 'aox', 'Aqoxy7G03636' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1YYJ7Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E1AF2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3HRB74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4X3ZEJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7F6VM6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.805HV8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82P426' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A50VLL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AY7U99' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B3XDAM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3FF4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DBZB80' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PF1JUH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RALJ2M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RWK4UY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SCX26U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM3TC1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T832D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UR837P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WB441U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y2LGU1' => 'arhy', 'AT1G55740' => 'ath', 'AT3G57520' => 'ath', 'AT4G01970' => 'ath', 'AT5G20250' => 'ath', 'AT5G40390' => 'ath', 'ATR0199G014' => 'atr', 'ATR0199G043' => 'atr', 'ATR0332G116' => 'atr', 'ATR0602G150' => 'atr', 'ATR0602G235' => 'atr', 'ATR0602G240' => 'atr', 'ATR0684G053' => 'atr', 'ATR0693G025' => 'atr', 'ATR0693G178' => 'atr', 'ATR0751G095' => 'atr', 'ATR0751G114' => 'atr', 'ATR0800G044' => 'atr', 'ATR1152G070' => 'atr', 'Atru.chr1.1068' => 'acertr', 'Atru.chr2.3841' => 'acertr', 'Atru.chr4.3034' => 'acertr', 'Atru.chr4.3035' => 'acertr', 'Atru.chr5.968' => 'acertr', 'Atru.chr6.2360' => 'acertr', 'Atru.chr6.2362' => 'acertr', 'Atru.chr7.1949' => 'acertr', 'Atru.chr9.1812' => 'acertr', 'Atru.chr9.2542' => 'acertr', 'AUR62001229' => 'cqu', 'AUR62011175' => 'cqu', 'AUR62011777' => 'cqu', 'AUR62013309' => 'cqu', 'AUR62013551' => 'cqu', 'AUR62017168' => 'cqu', 'AUR62022091' => 'cqu', 'AUR62024430' => 'cqu', 'AUR62024619' => 'cqu', 'AUR62024620' => 'cqu', 'AUR62024622' => 'cqu', 'AUR62026023' => 'cqu', 'AUR62026730' => 'cqu', 'AUR62035637' => 'cqu', 'BcaB01g02094' => 'bca', 'BcaB02g07597' => 'bca', 'BcaB04g16931' => 'bca', 'BcaB05g22856' => 'bca', 'BcaB06g27499' => 'bca', 'BcaB08g36537' => 'bca', 'BcaC01g01553' => 'bca', 'BcaC03g13746' => 'bca', 'BcaC04g19415' => 'bca', 'BcaC04g24024' => 'bca', 'BcaC07g40373' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p01710' => 'bna', 'BolC2t07030H' => 'bol', 'BolC3t21609H' => 'bol', 'BolC4t26314H' => 'bol', 'BolC8t50905H' => 'bol', 'BolC9t53089H' => 'bol', 'BolC9t58464H' => 'bol', 'BraA02t05563Z' => 'bra', 'BraA04t17001Z' => 'bra', 'BraA08t32093Z' => 'bra', 'BraA09t35807Z' => 'bra', 'BraA09t40490Z' => 'bra', 'BraA10t44044Z' => 'bra', 'C03p93050' => 'bna', 'C04p47160' => 'bna', 'C06p24580' => 'bna', 'C08p33050' => 'bna', 'C09p01560' => 'bna', 'C09p55950' => 'bna', 'CAN.G126.90' => 'can', 'CAN.G126.91' => 'can', 'CAN.G1662.2' => 'can', 'CAN.G21.10' => 'can', 'CAN.G293.19' => 'can', 'CAN.G30.11' => 'can', 'CAN.G338.10' => 'can', 'CAN.G473.1' => 'can', 'CAN.G623.55' => 'can', 'CAN.G77.6' => 'can', 'CAN.G809.83' => 'can', 'CAN.G822.1' => 'can', 'CANSAT11G1409' => 'cansat', 'CANSAT11G1527' => 'cansat', 'CANSAT25G2584' => 'cansat', 'CANSAT56G3146' => 'cansat', 'CANSAT64G2129' => 'cansat', 'CANSAT80G1463' => 'cansat', 'CANSAT80G2363' => 'cansat', 'CARHR045400' => 'chi', 'CARHR167740' => 'chi', 'CARHR192580' => 'chi', 'CARHR249700' => 'chi', 'CARHR249710' => 'chi', 'CARHR261630' => 'chi', 'Carub.0001s4424' => 'cru', 'Carub.0005s2436' => 'cru', 'Carub.0006s1864' => 'cru', 'Carub.0006s3526' => 'cru', 'Carub.0007s3521' => 'cru', 'Ca_04158_v3' => 'car', 'Ca_06424_v3' => 'car', 'Ca_06941_v3' => 'car', 'Ca_08469_v3' => 'car', 'Ca_09220_v3' => 'car', 'Ca_16116_v3' => 'car', 'Ca_16150_v3' => 'car', 'Ca_21950_v3' => 'car', 'Ca_23906_v3' => 'car', 'CBR_g41197' => 'cbr', 'CBR_g41198' => 'cbr', 'CBR_g46714' => 'cbr', 'Cc00_g10830' => 'ccan', 'Cc01_g21600' => 'ccan', 'Cc04_g11090' => 'ccan', 'Cc04_g11100' => 'ccan', 'Cc05_g15530' => 'ccan', 'Cc06_g08070' => 'ccan', 'Cc06_g16850' => 'ccan', 'Cc06_g16860' => 'ccan', 'Cc07_g01840' => 'ccan', 'Cc11_g00220' => 'ccan', 'CDE02G0012' => 'cde', 'CDE02G3737' => 'cde', 'CDE04G1544' => 'cde', 'CDE06G0507' => 'cde', 'CDE06G1565' => 'cde', 'CDE06G2306' => 'cde', 'CDE06G2805' => 'cde', 'CDE07G0867' => 'cde', 'CDE08G0520' => 'cde', 'CDE09G0548' => 'cde', 'CDE10G0127' => 'cde', 'CDE10G1042' => 'cde', 'CDE10G1316' => 'cde', 'Cfa000009' => 'cfa', 'Cfa003422' => 'cfa', 'Cfa005765' => 'cfa', 'Cfa005766' => 'cfa', 'Cfa005767' => 'cfa', 'Cfa007383' => 'cfa', 'Cfa009519' => 'cfa', 'Cfa016838' => 'cfa', 'Cfa019178' => 'cfa', 'Cfa019265' => 'cfa', 'Cfa027072' => 'cfa', 'Ciclev10004372m.g' => 'ccl', 'Ciclev10004399m.g' => 'ccl', 'Ciclev10006437m.g' => 'ccl', 'Ciclev10007519m.g' => 'ccl', 'Ciclev10007545m.g' => 'ccl', 'Ciclev10014333m.g' => 'ccl', 'Ciclev10018822m.g' => 'ccl', 'Ciclev10018941m.g' => 'ccl', 'Ciclev10019001m.g' => 'ccl', 'CiPaw.01G137300' => 'cil', 'CiPaw.03G042100' => 'cil', 'CiPaw.03G248400' => 'cil', 'CiPaw.04G027700' => 'cil', 'CiPaw.07G119300' => 'cil', 'CiPaw.08G088100' => 'cil', 'CiPaw.09G036600' => 'cil', 'CiPaw.09G111900' => 'cil', 'CiPaw.10G032300' => 'cil', 'CiPaw.11G022300' => 'cil', 'CiPaw.11G209300' => 'cil', 'CiPaw.12G033000' => 'cil', 'ClCG01G013370' => 'cla', 'ClCG04G003310' => 'cla', 'ClCG06G011490' => 'cla', 'ClCG06G017500' => 'cla', 'ClCG09G004970' => 'cla', 'ClCG10G013980' => 'cla', 'ClCG11G017930' => 'cla', 'COL.COLO4_02745' => 'col', 'COL.COLO4_07766' => 'col', 'COL.COLO4_07767' => 'col', 'COL.COLO4_19457' => 'col', 'COL.COLO4_19458' => 'col', 'COL.COLO4_23208' => 'col', 'COL.COLO4_28216' => 'col', 'COL.COLO4_30129' => 'col', 'COL.COLO4_30132' => 'col', 'COL.COLO4_31957' => 'col', 'COL.COLO4_31958' => 'col', 'COL.COLO4_35153' => 'col', 'Cpa.g.sc1077.4' => 'cpa', 'Cpa.g.sc108.53' => 'cpa', 'Cpa.g.sc18.80' => 'cpa', 'Cpa.g.sc27.196' => 'cpa', 'Cpa.g.sc4.14' => 'cpa', 'Cpa.g.sc4.15' => 'cpa', 'Cpa.g.sc4.16' => 'cpa', 'Cpa.g.sc46.40' => 'cpa', 'Cpa.g.sc92.35' => 'cpa', 'Cre16.g666334' => 'cre', 'CsaV3_1G000950' => 'csa', 'CsaV3_1G008720' => 'csa', 'CsaV3_1G026710' => 'csa', 'CsaV3_3G042690' => 'csa', 'CsaV3_4G011820' => 'csa', 'CsaV3_4G033560' => 'csa', 'CsaV3_7G030090' => 'csa', 'CSS0001300' => 'camsi', 'CSS0002256' => 'camsi', 'CSS0006516' => 'camsi', 'CSS0014911' => 'camsi', 'CSS0016821' => 'camsi', 'CSS0021637' => 'camsi', 'CSS0022856' => 'camsi', 'CSS0024518' => 'camsi', 'CSS0025347' => 'camsi', 'CSS0026938' => 'camsi', 'CSS0030283' => 'camsi', 'CSS0032677' => 'camsi', 'CSS0036490' => 'camsi', 'CSS0043340' => 'camsi', 'CSS0050491' => 'camsi', 'DCAR_002254' => 'dca', 'DCAR_007672' => 'dca', 'DCAR_008933' => 'dca', 'DCAR_008938' => 'dca', 'DCAR_009098' => 'dca', 'DCAR_010204' => 'dca', 'DCAR_011247' => 'dca', 'DCAR_013594' => 'dca', 'DCAR_013769' => 'dca', 'DCAR_020480' => 'dca', 'DCAR_020886' => 'dca', 'DCAR_020888' => 'dca', 'Dinv04069' => 'din', 'Dinv06478' => 'din', 'Dinv06829' => 'din', 'Dinv15156' => 'din', 'Dinv20617' => 'din', 'Dinv33132' => 'din', 'Dinv33452' => 'din', 'Dinv36479' => 'din', 'Dinv38503' => 'din', 'Dinv39589' => 'din', 'Dinv40898' => 'din', 'Dinv41161' => 'din', 'Duzib068G0197' => 'dzi', 'Duzib093G2223' => 'dzi', 'Duzib128G1605' => 'dzi', 'Duzib133G0616' => 'dzi', 'Duzib138G1931' => 'dzi', 'Duzib147G0050' => 'dzi', 'Duzib150G0955' => 'dzi', 'Duzib168G2387' => 'dzi', 'Duzib213G0758' => 'dzi', 'Duzib235G0430' => 'dzi', 'Duzib264G1194' => 'dzi', 'Duzib268G1807' => 'dzi', 'ECA234G1088' => 'eca', 'ECA238G4743' => 'eca', 'ECA246G1546' => 'eca', 'ECA246G4686' => 'eca', 'ECA248G1680' => 'eca', 'EL10Ac1g01521' => 'bvu', 'EL10Ac3g07070' => 'bvu', 'EL10Ac4g07505' => 'bvu', 'EL10Ac5g10688' => 'bvu', 'EL10Ac7g18025' => 'bvu', 'EL10Ac8g18719' => 'bvu', 'EL10As5g23559' => 'bvu', 'EL10As5g23560' => 'bvu', 'Eucgr.A02374' => 'egr', 'Eucgr.B00178' => 'egr', 'Eucgr.B00223' => 'egr', 'Eucgr.C04266' => 'egr', 'Eucgr.E04226' => 'egr', 'Eucgr.F01231' => 'egr', 'Eucgr.F03658' => 'egr', 'Eucgr.H00997' => 'egr', 'Eucgr.I01755' => 'egr', 'Eucgr.I01757' => 'egr', 'Eucgr.J02233' => 'egr', 'Eucgr.K02813' => 'egr', 'Eucgr.K03553' => 'egr', 'Eucgr.L02707' => 'egr', 'Eucgr.L03032' => 'egr', 'Eucgr.L03033' => 'egr', 'Eucgr.L03702' => 'egr', 'FAN01G2115' => 'fan', 'FAN02G0245' => 'fan', 'FAN02G0940' => 'fan', 'FAN03G2099' => 'fan', 'FAN04G1684' => 'fan', 'FAN05G0436' => 'fan', 'FAN05G4104' => 'fan', 'FAN06G3538' => 'fan', 'FAN06G5075' => 'fan', 'FAN08G2485' => 'fan', 'FAN09G1946' => 'fan', 'FAN09G3763' => 'fan', 'FAN10G2138' => 'fan', 'FAN11G1772' => 'fan', 'FAN14G0344' => 'fan', 'FAN14G1351' => 'fan', 'FAN14G2512' => 'fan', 'FAN14G4154' => 'fan', 'FAN18G0080' => 'fan', 'FAN19G2286' => 'fan', 'FAN19G3096' => 'fan', 'FAN21G3173' => 'fan', 'FAN23G1523' => 'fan', 'FAN23G2434' => 'fan', 'FAN25G2743' => 'fan', 'FAN26G0771' => 'fan', 'FAN28G0293' => 'fan', 'FAN28G0597' => 'fan', 'FvH4_1g02620' => 'fve', 'FvH4_1g27000' => 'fve', 'FvH4_3g00160' => 'fve', 'FvH4_3g41930' => 'fve', 'FvH4_5g05860' => 'fve', 'FvH4_6g23550' => 'fve', 'FvH4_6g51361' => 'fve', 'FvH4_6g51380' => 'fve', 'FvH4_7g13680' => 'fve', 'Glyma.02G303300' => 'gma', 'Glyma.03G137900' => 'gma', 'Glyma.04G190000' => 'gma', 'Glyma.05G003900' => 'gma', 'Glyma.05G040300' => 'gma', 'Glyma.06G175466' => 'gma', 'Glyma.06G175532' => 'gma', 'Glyma.06G179200' => 'gma', 'Glyma.09G016600' => 'gma', 'Glyma.13G160100' => 'gma', 'Glyma.14G010500' => 'gma', 'Glyma.17G111400' => 'gma', 'Glyma.19G004400' => 'gma', 'Glyma.19G140700' => 'gma', 'Glyma.19G217700' => 'gma', 'Gohir.A01G132000' => 'ghi', 'Gohir.A03G075400' => 'ghi', 'Gohir.A04G002300' => 'ghi', 'Gohir.A05G176800' => 'ghi', 'Gohir.A05G357500' => 'ghi', 'Gohir.A07G062600' => 'ghi', 'Gohir.A07G062650' => 'ghi', 'Gohir.A08G088562' => 'ghi', 'Gohir.A09G028700' => 'ghi', 'Gohir.A12G123501' => 'ghi', 'Gohir.A12G186301' => 'ghi', 'Gohir.A12G186351' => 'ghi', 'Gohir.A13G130100' => 'ghi', 'Gohir.D01G121100' => 'ghi', 'Gohir.D02G120050' => 'ghi', 'Gohir.D03G102100' => 'ghi', 'Gohir.D04G056600' => 'ghi', 'Gohir.D05G180200' => 'ghi', 'Gohir.D05G387000' => 'ghi', 'Gohir.D07G067200' => 'ghi', 'Gohir.D08G099600' => 'ghi', 'Gohir.D09G028250' => 'ghi', 'Gohir.D12G127100' => 'ghi', 'Gohir.D12G189300' => 'ghi', 'Gohir.D13G133000' => 'ghi', 'Gorai.001G070800' => 'gra', 'Gorai.002G147800' => 'gra', 'Gorai.003G107500' => 'gra', 'Gorai.004G107400' => 'gra', 'Gorai.005G133900' => 'gra', 'Gorai.006G032900' => 'gra', 'Gorai.008G138000' => 'gra', 'Gorai.008G203100' => 'gra', 'Gorai.009G185100' => 'gra', 'Gorai.009G453700' => 'gra', 'Gorai.012G063500' => 'gra', 'Gorai.013G149200' => 'gra', 'GSVIVG01002784001' => 'vvi', 'GSVIVG01004662001' => 'vvi', 'GSVIVG01005620001' => 'vvi', 'GSVIVG01007597001' => 'vvi', 'GSVIVG01007681001' => 'vvi', 'GSVIVG01014778001' => 'vvi', 'GSVIVG01015589001' => 'vvi', 'GSVIVG01028143001' => 'vvi', 'GSVIVG01032425001' => 'vvi', 'GSVIVG01033305001' => 'vvi', 'GSVIVG01034980001' => 'vvi', 'HanXRQChr05g0160181' => 'han', 'HanXRQChr10g0315851' => 'han', 'HanXRQChr13g0390751' => 'han', 'HanXRQChr17g0548561' => 'han', 'Haze_05070' => 'cav', 'Haze_05071' => 'cav', 'Haze_07051' => 'cav', 'Haze_07556' => 'cav', 'Haze_07624' => 'cav', 'Haze_07625' => 'cav', 'Haze_09899' => 'cav', 'Haze_14725' => 'cav', 'Haze_19881' => 'cav', 'Haze_19889' => 'cav', 'Haze_25510' => 'cav', 'Hma1.2p1_0046F.1_g026900' => 'hma', 'Hma1.2p1_0046F.1_g027330' => 'hma', 'Hma1.2p1_0089F.1_g045470' => 'hma', 'Hma1.2p1_0117F.1_g056360' => 'hma', 'Hma1.2p1_0321F.1_g124190' => 'hma', 'Hma1.2p1_0391F.1_g142740' => 'hma', 'Hma1.2p1_0408F.1_g146560' => 'hma', 'Hma1.2p1_0486F.1_g163470' => 'hma', 'Hma1.2p1_0497F.1_g166370' => 'hma', 'Hma1.2p1_0696F.1_g204720' => 'hma', 'Hma1.2p1_0989F.1_g244790' => 'hma', 'Hma1.2p1_1726F.1_g299485' => 'hma', 'Hma1.2p1_2861F.1_g329550' => 'hma', 'HPP92_000305' => 'vpl', 'HPP92_010188' => 'vpl', 'HPP92_010210' => 'vpl', 'HPP92_010880' => 'vpl', 'HPP92_010881' => 'vpl', 'HPP92_010882' => 'vpl', 'HPP92_010924' => 'vpl', 'HPP92_010925' => 'vpl', 'HPP92_017083' => 'vpl', 'HPP92_022816' => 'vpl', 'Hund05607' => 'sun', 'Hund09283' => 'sun', 'Hund09651' => 'sun', 'Hund17426' => 'sun', 'Hund19156' => 'sun', 'Hund22987' => 'sun', 'Hund26537' => 'sun', 'Lalb_Chr01g0017461' => 'lal', 'Lalb_Chr04g0247691' => 'lal', 'Lalb_Chr06g0175831' => 'lal', 'Lalb_Chr08g0236651' => 'lal', 'Lalb_Chr08g0236851' => 'lal', 'Lalb_Chr12g0201771' => 'lal', 'Lalb_Chr13g0301581' => 'lal', 'Lalb_Chr15g0078001' => 'lal', 'Lj1A898G72' => 'lonja', 'Lj1C1249G6' => 'lonja', 'Lj1g0005684' => 'lja', 'Lj1g0018747' => 'lja', 'Lj1g0025492' => 'lja', 'Lj1g0027567' => 'lja', 'Lj2C1208T1' => 'lonja', 'Lj2g0002756' => 'lja', 'Lj3g0001435' => 'lja', 'Lj4g0004012' => 'lja', 'Lj4g0007069' => 'lja', 'Lj5A128G59' => 'lonja', 'Lj7A433T53' => 'lonja', 'Lj7C597T15' => 'lonja', 'Lj9A440T65' => 'lonja', 'Lj9A440T66' => 'lonja', 'LjContig00081g0002442' => 'lja', 'Lju124C37T7' => 'lonja', 'Lsat_1_v5_gn_0_32100' => 'lsa', 'Lsat_1_v5_gn_5_162541' => 'lsa', 'Lsat_1_v5_gn_5_661' => 'lsa', 'Lsat_1_v5_gn_5_92921' => 'lsa', 'Manes.01G175500' => 'mes', 'Manes.01G229800' => 'mes', 'Manes.05G206000' => 'mes', 'Manes.06G047200' => 'mes', 'Manes.06G108300' => 'mes', 'Manes.08G049600' => 'mes', 'Manes.09G024300' => 'mes', 'Manes.09G072200' => 'mes', 'Manes.14G057700' => 'mes', 'Manes.14G062500' => 'mes', 'Manes.17G115500' => 'mes', 'Mapoly0049s0057' => 'mpo', 'MBI01_g26746_MAGBIO' => 'mbi', 'MBI06_g02298_MAGBIO' => 'mbi', 'MBI06_g02299_MAGBIO' => 'mbi', 'MBI10_g00727_MAGBIO' => 'mbi', 'MBI11_g11858_MAGBIO' => 'mbi', 'MBI12_g15660_MAGBIO' => 'mbi', 'MBI14_g00955_MAGBIO' => 'mbi', 'MBI15_g13305_MAGBIO' => 'mbi', 'MBI16_g23857_MAGBIO' => 'mbi', 'MBI17_g21976_MAGBIO' => 'mbi', 'MBI18_g44338_MAGBIO' => 'mbi', 'MBI18_g46555_MAGBIO' => 'mbi', 'MBI19_g03254_MAGBIO' => 'mbi', 'MCO14G393' => 'mco', 'MD02G1025500' => 'mdo', 'MD02G1025600' => 'mdo', 'MD02G1026200' => 'mdo', 'MD02G1026300' => 'mdo', 'MD03G1040100' => 'mdo', 'MD06G1169800' => 'mdo', 'MD09G1161700' => 'mdo', 'MD09G1162100' => 'mdo', 'MD09G1285100' => 'mdo', 'MD10G1341400' => 'mdo', 'MD10G1341500' => 'mdo', 'MD10G1341600' => 'mdo', 'MD11G1041500' => 'mdo', 'MD12G1077800' => 'mdo', 'MD12G1077900' => 'mdo', 'MD14G1070200' => 'mdo', 'MD14G1070300' => 'mdo', 'MD14G1175300' => 'mdo', 'MD15G1191000' => 'mdo', 'MD15G1191100' => 'mdo', 'MD17G1030100' => 'mdo', 'Medtr1g052515' => 'mtr', 'Medtr1g097450' => 'mtr', 'Medtr3g075510' => 'mtr', 'Medtr3g077280' => 'mtr', 'Medtr3g110050' => 'mtr', 'Medtr4g105250' => 'mtr', 'Medtr4g115330' => 'mtr', 'Medtr5g065520' => 'mtr', 'Medtr5g096820' => 'mtr', 'Medtr6g004880' => 'mtr', 'Medtr7g091880' => 'mtr', 'Medtr7g106910' => 'mtr', 'Medtr7g109790' => 'mtr', 'Medtr8g088020' => 'mtr', 'MELO3C002287.2' => 'cme', 'MELO3C009979.2' => 'cme', 'MELO3C010314.2' => 'cme', 'MELO3C015912.2' => 'cme', 'MELO3C023110.2' => 'cme', 'MELO3C025599.2' => 'cme', 'MELO3C026247.2' => 'cme', 'Migut.D00067' => 'egut', 'Migut.D02019' => 'egut', 'Migut.H00086' => 'egut', 'Migut.H01635' => 'egut', 'Migut.J01217' => 'egut', 'Migut.J01768' => 'egut', 'Migut.K00079' => 'egut', 'Migut.K00425' => 'egut', 'Migut.K01390' => 'egut', 'Migut.M01595' => 'egut', 'Migut.M01596' => 'egut', 'Migut.O00186' => 'egut', 'Migut.O00187' => 'egut', 'MSTRG.11510' => 'ama', 'MSTRG.18088' => 'ama', 'MSTRG.19870' => 'ama', 'MSTRG.21701' => 'ama', 'MSTRG.24032' => 'ama', 'MSTRG.26118' => 'ama', 'MSTRG.4343' => 'ama', 'MSTRG.6436' => 'ama', 'MSTRG.7031' => 'ama', 'Nitab4.5_0000152g0170' => 'nta', 'Nitab4.5_0000222g0040' => 'nta', 'Nitab4.5_0000510g0200' => 'nta', 'Nitab4.5_0001303g0060' => 'nta', 'Nitab4.5_0002008g0050' => 'nta', 'Nitab4.5_0002649g0010' => 'nta', 'Nitab4.5_0002682g0060' => 'nta', 'Nitab4.5_0003542g0100' => 'nta', 'Nitab4.5_0005432g0030' => 'nta', 'Nitab4.5_0005465g0030' => 'nta', 'Nitab4.5_0009377g0040' => 'nta', 'Nitab4.5_0009705g0010' => 'nta', 'Nitab4.5_0012111g0010' => 'nta', 'Nn1g02419' => 'nnu', 'Nn1g06759' => 'nnu', 'Nn1g08399' => 'nnu', 'Nn1g08438' => 'nnu', 'Nn1g08445' => 'nnu', 'Nn1g09444' => 'nnu', 'Nn2g12118' => 'nnu', 'Nn2g14617' => 'nnu', 'Nn2g15339' => 'nnu', 'Nn3g16652' => 'nnu', 'Nn3g21752' => 'nnu', 'Nn4g22662' => 'nnu', 'Nn4g23520' => 'nnu', 'Nn7g36230' => 'nnu', 'Nn8g39543' => 'nnu', 'Nn8g39544' => 'nnu', 'Nn8g39546' => 'nnu', 'Nn8g39547' => 'nnu', 'Oeu000513.1' => 'oeu', 'Oeu000817.1' => 'oeu', 'Oeu006275.1' => 'oeu', 'Oeu008138.1' => 'oeu', 'Oeu008923.1' => 'oeu', 'Oeu019691.1' => 'oeu', 'Oeu023462.1' => 'oeu', 'Oeu024711.1' => 'oeu', 'Oeu031378.1' => 'oeu', 'Oeu031895.2' => 'oeu', 'Oeu032453.1' => 'oeu', 'Oeu032994.1' => 'oeu', 'Oeu033147.3' => 'oeu', 'Oeu038256.1' => 'oeu', 'Oeu038778.1' => 'oeu', 'Oeu048865.1' => 'oeu', 'Oeu049925.1' => 'oeu', 'Oeu052178.1' => 'oeu', 'Oeu054232.1' => 'oeu', 'Oeu054617.1' => 'oeu', 'Oeu055965.1' => 'oeu', 'Oeu057058.1' => 'oeu', 'Oeu062675.1' => 'oeu', 'Oeu063469.1' => 'oeu', 'Oeu064309.1' => 'oeu', 'Oeu064820.1' => 'oeu', 'Os01g0170000' => 'osa', 'Os03g0808900' => 'osa', 'Os04g0481100' => 'osa', 'Os06g0172800' => 'osa', 'Os07g0209100' => 'osa', 'Os08g0495800' => 'osa', 'Os11g0435500' => 'osa', 'Os12g0555400' => 'osa', 'Peaxi162Scf00088g01328' => 'pax', 'Peaxi162Scf00089g01121' => 'pax', 'Peaxi162Scf00089g01128' => 'pax', 'Peaxi162Scf00089g01521' => 'pax', 'Peaxi162Scf00198g00212' => 'pax', 'Peaxi162Scf00232g00416' => 'pax', 'Peaxi162Scf00493g00434' => 'pax', 'Peaxi162Scf00691g00621' => 'pax', 'PGR004G0504' => 'pgr', 'PGR031G2187' => 'pgr', 'PGR042G1496' => 'pgr', 'PGR083G1254' => 'pgr', 'PGR083G2598' => 'pgr', 'PGR083G2759' => 'pgr', 'PGR083G2858' => 'pgr', 'PGR102G0131' => 'pgr', 'PGR142G1648' => 'pgr', 'PGR142G3965' => 'pgr', 'PGSC0003DMG400000513' => 'stu', 'PGSC0003DMG400009017' => 'stu', 'PGSC0003DMG400015154' => 'stu', 'PGSC0003DMG400018109' => 'stu', 'PGSC0003DMG400022258' => 'stu', 'PGSC0003DMG400023297' => 'stu', 'PGSC0003DMG400030891' => 'stu', 'PGSC0003DMG400030910' => 'stu', 'PGSC0003DMG400037864' => 'stu', 'Phvul.001G135200' => 'pvu', 'Phvul.001G214300' => 'pvu', 'Phvul.003G168800' => 'pvu', 'Phvul.004G007100' => 'pvu', 'Phvul.006G135500' => 'pvu', 'Phvul.007G253200' => 'pvu', 'Phvul.008G282600' => 'pvu', 'Phvul.009G171600' => 'pvu', 'Phvul.009G175400' => 'pvu', 'Potri.002G193700' => 'ptr', 'Potri.004G207900' => 'ptr', 'Potri.006G052800' => 'ptr', 'Potri.006G065700' => 'ptr', 'Potri.007G123400' => 'ptr', 'Potri.011G166700' => 'ptr', 'Potri.014G118400' => 'ptr', 'Potri.015G086400' => 'ptr', 'Potri.016G002300' => 'ptr', 'Potri.016G054700' => 'ptr', 'Potri.017G036700' => 'ptr', 'Potri.018G126400' => 'ptr', 'Potri.T124908' => 'ptr', 'Pp3c23_9080' => 'ppa', 'Pp3c8_5920' => 'ppa', 'PRCOL_00002875' => 'pco', 'Prupe.2G073100' => 'ppe', 'Prupe.3G008900' => 'ppe', 'Prupe.3G289900' => 'ppe', 'Prupe.4G001700' => 'ppe', 'Prupe.5G162400' => 'ppe', 'Prupe.5G169000' => 'ppe', 'Prupe.6G032400' => 'ppe', 'Prupe.7G064000' => 'ppe', 'Prupe.7G226100' => 'ppe', 'Prupe.7G248600' => 'ppe', 'Psat0s2597g0160' => 'psa', 'Psat0s3224g0200' => 'psa', 'Psat1g055560' => 'psa', 'Psat2g005600' => 'psa', 'Psat3g072120' => 'psa', 'Psat3g155360' => 'psa', 'Psat4g006400' => 'psa', 'Psat4g039000' => 'psa', 'Psat4g077120' => 'psa', 'Psat4g195160' => 'psa', 'Psat5g117960' => 'psa', 'Psat6g083720' => 'psa', 'Psat7g228400' => 'psa', 'PSO017G5139' => 'pso', 'PSO063G0204' => 'pso', 'PSO063G7500' => 'pso', 'PSO067G0080' => 'pso', 'PSO170G1952' => 'pso', 'PSO170G6092' => 'pso', 'PSO210G3525' => 'pso', 'PSO541G4785' => 'pso', 'PSO541G6187' => 'pso', 'PSO541G6431' => 'pso', 'PSO675G4223' => 'pso', 'PSO675G5951' => 'pso', 'PSO832G3060' => 'pso', 'QL01p003704' => 'qlo', 'QL02p075137' => 'qlo', 'QL02p089845' => 'qlo', 'QL05p037798' => 'qlo', 'QL05p066397' => 'qlo', 'QL05p067298' => 'qlo', 'QL07p020877' => 'qlo', 'QL08p001413' => 'qlo', 'QL08p001436' => 'qlo', 'QL09p001266' => 'qlo', 'QL10p000804' => 'qlo', 'QL10p000850' => 'qlo', 'QL10p006000' => 'qlo', 'QL10p006010' => 'qlo', 'QL10p008476' => 'qlo', 'QL11p046642' => 'qlo', 'QL11p046744' => 'qlo', 'QL12p019104' => 'qlo', 'RcHm_v2.0_Chr1g0353751' => 'rch', 'RcHm_v2.0_Chr2g0087631' => 'rch', 'RcHm_v2.0_Chr2g0091201' => 'rch', 'RcHm_v2.0_Chr2g0173061' => 'rch', 'RcHm_v2.0_Chr3g0481621' => 'rch', 'RcHm_v2.0_Chr3g0487291' => 'rch', 'RcHm_v2.0_Chr3g0487311' => 'rch', 'RcHm_v2.0_Chr5g0000211' => 'rch', 'RcHm_v2.0_Chr5g0075141' => 'rch', 'RcHm_v2.0_Chr7g0192011' => 'rch', 'RcHm_v2.0_Chr7g0192021' => 'rch', 'RcHm_v2.0_Chr7g0192961' => 'rch', 'Rhsim01G0061700' => 'rsi', 'Rhsim02G0088400' => 'rsi', 'Rhsim04G0100900' => 'rsi', 'Rhsim06G0234200' => 'rsi', 'Rhsim10G0018300' => 'rsi', 'Rhsim12G0166700' => 'rsi', 'Rhsim12G0169600' => 'rsi', 'Rhsim12G0169700' => 'rsi', 'Rhsim13G0003700' => 'rsi', 'Sabra02G0162600' => 'sbr', 'Sabra06G0037200' => 'sbr', 'Sabra06G0047900' => 'sbr', 'Sabra07G0096600' => 'sbr', 'Sabra07G0097000' => 'sbr', 'Sabra07G0099900' => 'sbr', 'Sabra08G0005000' => 'sbr', 'Sabra10G0112900' => 'sbr', 'Sabra11G0139600' => 'sbr', 'Sabra14G0087900' => 'sbr', 'Sabra15G0105300' => 'sbr', 'Sabra15G0109200' => 'sbr', 'Sabra16G0007000' => 'sbr', 'Sabra17G0024100' => 'sbr', 'SalBow1G0522' => 'sbo', 'SalBow1G6103' => 'sbo', 'SalBow1G7499' => 'sbo', 'SalBow1G7741' => 'sbo', 'SalBow1G8397' => 'sbo', 'SalBow3G4449' => 'sbo', 'SalBow5G2640' => 'sbo', 'SalBow5G3006' => 'sbo', 'SalBow5G4269' => 'sbo', 'SalBow5G4578' => 'sbo', 'SalBow5G5377' => 'sbo', 'SalBow6G2534' => 'sbo', 'SalBow6G3013' => 'sbo', 'SalBow6G4225' => 'sbo', 'SalBow8G1332' => 'sbo', 'SalBow8G2286' => 'sbo', 'SalBow8G3089' => 'sbo', 'SalBow8G3428' => 'sbo', 'SalBow8G4175' => 'sbo', 'Sc05g0000330' => 'sci', 'Sc08g0006290' => 'sci', 'Sc08g0006300' => 'sci', 'Sc08g0006310' => 'sci', 'Sc08g0006320' => 'sci', 'Sc10g0010240' => 'sci', 'Sc13g0001840' => 'sci', 'Sc16g0003230' => 'sci', 'Sc17g0000350' => 'sci', 'Sc17g0000360' => 'sci', 'Sc20g0000070' => 'sci', 'Sc24g0004190' => 'sci', 'Sed0000567' => 'sed', 'Sed0007777' => 'sed', 'Sed0008446' => 'sed', 'Sed0013764' => 'sed', 'Sed0014979' => 'sed', 'Sed0016778' => 'sed', 'Sed0020536' => 'sed', 'Sed0021184' => 'sed', 'Sed0021706' => 'sed', 'Sed0026045' => 'sed', 'Sed0028117' => 'sed', 'SEGI_00341' => 'sgi', 'SEGI_00961' => 'sgi', 'SEGI_01756' => 'sgi', 'SEGI_03115' => 'sgi', 'SEGI_03321' => 'sgi', 'SEGI_19248' => 'sgi', 'SEGI_23329' => 'sgi', 'SEGI_27138' => 'sgi', 'SEGI_27679' => 'sgi', 'SEGI_28164' => 'sgi', 'SEGI_37165' => 'sgi', 'SGA_v2.0_scaffold109G31072' => 'sas', 'SGA_v2.0_scaffold186G40240' => 'sas', 'SGA_v2.0_scaffold334G49084' => 'sas', 'SGA_v2.0_scaffold481G52315' => 'sas', 'SGA_v2.0_scaffold7G04167' => 'sas', 'SGA_v2.0_scaffold90G27805' => 'sas', 'SGA_v2.0_scaffold94G28466' => 'sas', 'SHI17340' => 'shi', 'SHI22297' => 'shi', 'SHI26317' => 'shi', 'SMO364G0113' => 'smo', 'Solyc01g079300.4' => 'sly', 'Solyc02g086530.4' => 'sly', 'Solyc03g058970.4' => 'sly', 'Solyc03g112500.4' => 'sly', 'Solyc05g016713.1' => 'sly', 'Solyc07g007930.3' => 'sly', 'Solyc07g065980.3' => 'sly', 'Sopen01g031080' => 'spe', 'Sopen02g031260' => 'spe', 'Sopen03g013100' => 'spe', 'Sopen03g031560' => 'spe', 'Sopen07g003810' => 'spe', 'Sopen07g034180' => 'spe', 'Sp5g05070' => 'spa', 'Sp6g01850' => 'spa', 'Sp6g24160' => 'spa', 'Sp7g01530' => 'spa', 'TAR365G0510' => 'tar', 'TAR374G0713' => 'tar', 'TAR381G1310' => 'tar', 'TAR383G0317' => 'tar', 'TAR383G0644' => 'tar', 'TAR383G0896' => 'tar', 'TAR623G0455' => 'tar', 'TAR625G0943' => 'tar', 'TAR626G1763' => 'tar', 'TAR627G0258' => 'tar', 'TAR629G2716' => 'tar', 'TAR629G3000' => 'tar', 'TAR633G0265' => 'tar', 'TAR633G2351' => 'tar', 'TAR636G0283' => 'tar', 'TAR636G1528' => 'tar', 'TAR636G1633' => 'tar', 'TAR636G2482' => 'tar', 'THA.LOC104800387' => 'tha', 'THA.LOC104802186' => 'tha', 'THA.LOC104805378' => 'tha', 'THA.LOC104811023' => 'tha', 'THA.LOC104824451' => 'tha', 'THA.LOC104827694' => 'tha', 'Thecc.01G316200' => 'tca', 'Thecc.03G023500' => 'tca', 'Thecc.03G023700' => 'tca', 'Thecc.03G117900' => 'tca', 'Thecc.03G118000' => 'tca', 'Thecc.04G015400' => 'tca', 'Thecc.05G158600' => 'tca', 'Thecc.06G243200' => 'tca', 'Thecc.07G004100' => 'tca', 'Thecc.07G004800' => 'tca', 'Thecc.09G132000' => 'tca', 'Thhalv10005800m.g' => 'esa', 'Thhalv10012821m.g' => 'esa', 'Thhalv10027649m.g' => 'esa', 'Thhalv10028420m.g' => 'esa', 'TPR.G11611' => 'tpr', 'TPR.G1303' => 'tpr', 'TPR.G14072' => 'tpr', 'TPR.G15457' => 'tpr', 'TPR.G20682' => 'tpr', 'TPR.G24768' => 'tpr', 'TPR.G24797' => 'tpr', 'TPR.G256' => 'tpr', 'TPR.G27780' => 'tpr', 'TPR.G29420' => 'tpr', 'TPR.G29480' => 'tpr', 'TPR.G29624' => 'tpr', 'TPR.G33607' => 'tpr', 'TPR.G36002' => 'tpr', 'TPR.G36300' => 'tpr', 'TPR.G3737' => 'tpr', 'TPR.G37482' => 'tpr', 'TPR.G39574' => 'tpr', 'TPR.G4065' => 'tpr', 'TPR.G8476' => 'tpr', 'TWI09G0404' => 'twi', 'TWI23G1046' => 'twi', 'TWI34G0914' => 'twi', 'TWI34G1769' => 'twi', 'TWI36G0240' => 'twi', 'TWI38G1579' => 'twi', 'TWI39G0007' => 'twi', 'TWI53G0822' => 'twi', 'TWI56G0365' => 'twi', 'TWI63G0170' => 'twi', 'TWI63G1696' => 'twi', 'TWI74G0532' => 'twi', 'unitig_0.g1602' => 'ugi', 'unitig_0.g1603' => 'ugi', 'unitig_0.g1604' => 'ugi', 'unitig_0.g22' => 'ugi', 'unitig_0.g23' => 'ugi', 'unitig_0.g2719' => 'ugi', 'unitig_0.g2720' => 'ugi', 'unitig_0.g2721' => 'ugi', 'unitig_0.g739' => 'ugi', 'unitig_0.g966' => 'ugi', 'unitig_0.g967' => 'ugi', 'unitig_22.g5445' => 'ugi', 'unitig_22.g5446' => 'ugi', 'unitig_22.g5447' => 'ugi', 'unitig_32.g10662' => 'ugi', 'unitig_578.g16469' => 'ugi', 'unitig_578.g16631' => 'ugi', 'unitig_748.g7165' => 'ugi', 'unitig_8.g3508' => 'ugi', 'vmacro02391' => 'vma', 'vmacro03345' => 'vma', 'vmacro05458' => 'vma', 'vmacro05459' => 'vma', 'vmacro05855' => 'vma', 'vmacro07720' => 'vma', 'vmacro09083' => 'vma', 'vmacro09084' => 'vma', 'vmacro09760' => 'vma', 'vmacro11631' => 'vma', 'vmacro15720' => 'vma', 'vmacro16633' => 'vma', 'vmacro16681' => 'vma', 'vmacro16682' => 'vma', 'vmacro16683' => 'vma', 'vmacro22888' => 'vma', 'vmacro23140' => 'vma', 'vmacro23141' => 'vma', 'VMungo0464G0830' => 'vmu', 'VMungo0540G0728' => 'vmu', 'VMungo0647G0243' => 'vmu', 'VMungo0720G2802' => 'vmu', 'VMungo1215G1211' => 'vmu', 'VMungo1309G0026' => 'vmu', 'VMungo1309G1870' => 'vmu', 'VMungo1383G0554' => 'vmu', 'VMungo1383G3103' => 'vmu', 'Zm00001eb005800' => 'zma', 'Zm00001eb033870' => 'zma', 'Zm00001eb033880' => 'zma', 'Zm00001eb061880' => 'zma', 'Zm00001eb079430' => 'zma', 'Zm00001eb079440' => 'zma', 'Zm00001eb079460' => 'zma', 'Zm00001eb122980' => 'zma', 'Zm00001eb129390' => 'zma', 'Zm00001eb281720' => 'zma', 'Zm00001eb303190' => 'zma', 'Zm00001eb394620' => 'zma' ) $gf_id = 'HOM05D000527' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000527' ) $data_identifier = 'HOM05D000527' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 13, 'aar' => (int) 4, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 5, 'aly' => (int) 5, 'aox' => (int) 10, 'arhy' => (int) 21, 'ath' => (int) 5, 'atr' => (int) 13, 'acertr' => (int) 10, 'cqu' => (int) 14, 'bca' => (int) 11, 'bol' => (int) 6, 'bra' => (int) 6, 'can' => (int) 12, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 5, 'car' => (int) 9, 'cbr' => (int) 3, 'ccan' => (int) 10, 'cde' => (int) 13, 'cfa' => (int) 11, 'ccl' => (int) 9, 'cil' => (int) 12, 'cla' => (int) 7, 'col' => (int) 12, 'cpa' => (int) 9, 'cre' => (int) 1, 'csa' => (int) 7, 'camsi' => (int) 15, 'dca' => (int) 12, 'din' => (int) 12, 'dzi' => (int) 12, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 17, 'fan' => (int) 28, 'fve' => (int) 9, 'gma' => (int) 15, 'ghi' => (int) 25, 'gra' => (int) 12, 'vvi' => (int) 11, 'han' => (int) 4, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 8, 'lonja' => (int) 9, 'lja' => (int) 9, 'lsa' => (int) 4, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 13, 'mco' => (int) 1, 'mdo' => (int) 21, 'mtr' => (int) 14, 'cme' => (int) 7, 'egut' => (int) 13, 'ama' => (int) 9, 'nta' => (int) 13, 'nnu' => (int) 18, 'oeu' => (int) 26, 'osa' => (int) 8, 'pax' => (int) 8, 'pgr' => (int) 10, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 13, 'ppa' => (int) 2, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 13, 'pso' => (int) 13, 'qlo' => (int) 18, 'rch' => (int) 12, 'rsi' => (int) 9, 'sbr' => (int) 14, 'sbo' => (int) 19, 'sci' => (int) 12, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 6, 'spa' => (int) 4, 'tar' => (int) 18, 'tha' => (int) 6, 'tca' => (int) 11, 'esa' => (int) 4, 'tpr' => (int) 20, 'twi' => (int) 12, 'ugi' => (int) 19, 'vma' => (int) 18, 'vmu' => (int) 9, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394620' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1